Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948741.1_cds_XP_016489905.1_80380
CDS Infomation

[gene=LOC107809745] [db_xref=GeneID:107809745] [protein=zinc finger MYM-type protein 1-like] [partial=3'] [protein_id=XP_016489905.1] [location=complement(join(<3605..3941,4110..5063,5177..5924,6344..6353))] [gbkey=CDS]
Sequence

ATGGGAAAAGTTTGTGTTACAATAAAGAGATTTTACCCTCCATTATCTTTCAAGTTGCCA
CAACCAAGTTCATCCTCTCCAATTGCTGCTCCCATGGAACAAAATTTGAACCAATTAGAA
GAGCAACCTCAATCCTCTAAAAGACAAAGACAAGGAATAGATCTTTATTCTTTACCAGTT
GATCCAAAGGAGAGAATACCCATTAGAGATTATCATCCAAATGAGCGTGATGAGATTAGA
AGAGAATATCTCCAAAGAGGTCCTTACCAACTCCGATATCATAAGTTTCCTCAAAGAGAT
TTTTCGGGCTTAAAGCGTCGTTTCAATCCTAAATGGTTTGATGAATATCGTAATTTGTTG
GAGTATAGTGTGATAGAAGATGCAGATTATTGTTTGTGTTATTACTTGTTTCAAGATGAA
GACATTCATCAAGGTGGAGGCGATGTATTTTCAAGTTTAGGATTTAAGAGTTGGCAAAAA
AAGAAGAGATTCGATATTCATGTTGGTAAGTCGAGTAGTATTCATAATCATGCAAAAAGG
AAATGTGAAGATCTATTAAAACAAAAACAGTCAATTCAAACTTCATTTGATAGGCAATCC
AGTCAAACCAAGCTCGAATACAAAATTCGCTTGAAGGCTTCAATTGAGGTTGTGAGACTC
CTATTGAATCAAGAATTGGCATTCCGTGGACATCGTGAAGATGAATTATCATTAAACAAT
GGTAACTTTCTTGATATTCTTTCATGGTATGCAGAGAGCAATTATGGAGATCTAAATGGA
GACTTTTTTGCATTGCTAGTTGATGAATCATGTGATGTATCACGTAAAGAGCAATTAGTT
ATTGTCTTGCGATATGTTAATAGACGTGGATCTGTGGTGGAGCATTTTATTGGGATCGTT
CATGTTCGTAATACTAGTGTTTTATGTTTAAAGAAAGCAATTGTTGATTACCTTGCTCAA
CATTCTTTGAGTTTATCTTATGTGCGTGGACAATGCTATGATGGAGCAAACAACATGCAA
AGGGATTTACGTGGCCTCAAAACTTTGATTCAACAAGAAAGTAAATCTGCTTATTCCATT
CATTGTTTTGCACACCAACTTCAATTGACTCTTGTTGCGGTATCCAAAAAGTATCTTGAA
GTGGGAGAACTTGTATTGTTAGTTTCTAATGTATTGAATATAGTGGGAGGTTCTTTTAAA
TGTATGGATGATCTTCGAGAATCTCAAGCAGAAAAAGTTCAAGAGGCATTAGACATGGGT
GAACTTGAAACTGGTAGGGGTTTGAATCAAGAACTTGGTCTTGCCAGAGTTGCCGATACT
CATTGGGGTTCGCACTACAAATCTTTTAAGAACTTTATTTTTATGTTTGGCTCAATTATT
GATGTTCTTGATACTATCGTTGTTGATGCCCAAACTTTAGAAGGAAGAGCTAAGGCAAAG
GGATATCTTAGCACTTGTCAAACATTTGAGGTTGCTTTCATGTTGCACCTAATGAGAGAT
ATTTTGGGGATCACAAATGAGCTTAATACATCCTTACAAAAAAAGGAGCAAGATATTACA
AATGTTATTCTACTTGTTGAAGTGGCAAAGAAACGGTTGCAAAAGCTAAGAGAAGAAGAA
TGTGATTCACTTATTGATAAGGTGTCTGCATTTTGTGTCAAGTATAATATTTTGATACCA
AACTTTGATGACTTCTATGTTAACTCCGGAAGTTTTGACATAAACAAGATATTGATGACG
GTTGAATTGTATCCTGATGATTTTGATGAGAATATAATGATTACGCTCAAGAATCAACTT
GAAACTTATATTGTTGATGTTCGTGATGTTGATGAAAGGTTCTCAAATCTACAAGGACTT
GTTGATCTTTCTGATATACTAGTTAAGACAAAGAAGCATTTGAATTATGCATTTGTGTTT
CGCCTTGTGAAATTTGCTTTGCTTCTACCAGTTGCCACTGCTATAGTTGAAAGAACTTTC
TCGGCGATGATGTTGATCAAGAGTGAATTGCGAAACCGAATGAATGACGAATTCATGAGC
GGATGTTTG

Peptide Sequence

PEP ID

XP_016489905.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like, partial [Nicotiana tabacum]
Sequence

MGKVCVTIKRFYPPLSFKLPQPSSSSPIAAPMEQNLNQLEEQPQSSKRQRQGIDLYSLPV
DPKERIPIRDYHPNERDEIRREYLQRGPYQLRYHKFPQRDFSGLKRRFNPKWFDEYRNLL
EYSVIEDADYCLCYYLFQDEDIHQGGGDVFSSLGFKSWQKKKRFDIHVGKSSSIHNHAKR
KCEDLLKQKQSIQTSFDRQSSQTKLEYKIRLKASIEVVRLLLNQELAFRGHREDELSLNN
GNFLDILSWYAESNYGDLNGDFFALLVDESCDVSRKEQLVIVLRYVNRRGSVVEHFIGIV
HVRNTSVLCLKKAIVDYLAQHSLSLSYVRGQCYDGANNMQRDLRGLKTLIQQESKSAYSI
HCFAHQLQLTLVAVSKKYLEVGELVLLVSNVLNIVGGSFKCMDDLRESQAEKVQEALDMG
ELETGRGLNQELGLARVADTHWGSHYKSFKNFIFMFGSIIDVLDTIVVDAQTLEGRAKAK
GYLSTCQTFEVAFMLHLMRDILGITNELNTSLQKKEQDITNVILLVEVAKKRLQKLREEE
CDSLIDKVSAFCVKYNILIPNFDDFYVNSGSFDINKILMTVELYPDDFDENIMITLKNQL
ETYIVDVRDVDERFSNLQGLVDLSDILVKTKKHLNYAFVFRLVKFALLLPVATAIVERTF
SAMMLIKSELRNRMNDEFMSGCL

Transcript Sequence

Gene sequence data has not been registered.